BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F01SP1|AL427640
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1501 1833 0.0
>3x_Contig1501
Length = 10010
Score = 1833 bits (923), Expect = 0.0
Identities = 969/978 (99%), Gaps = 6/978 (0%)
Strand = Plus / Plus
Query: 2 ttcacggtccgctttcatcaatctaacaatacgttctctttcctgttgttctgtcaactg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1348 ttcacggtccgctttcatcaatctaacaatacgttctctttcctgttgttctgtcaactg 1407
Query: 62 gtgcttcttggcctttatttggtactccatcaatttcgcattttgtgacagacagctacc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1408 gtgcttcttggcctttatttggtactccatcaatttcgcattttgtgacagacagctacc 1467
Query: 122 ggacctggcgccggtatcaccagcggcaccaacggtattggatgcatcaacggcatccgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1468 ggacctggcgccggtatcaccagcggcaccaacggtattggatgcatcaacggcatccgt 1527
Query: 182 ttcagagattctcctcttgcttttaccaactgcccggatcaacctagtagcaaatccgtc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1528 ttcagagattctcctcttgcttttaccaactgcccggatcaacctagtagcaaatccgtc 1587
Query: 242 catgtccaactgatctggatttatcatctccactatttgtcccttagcaatacaataaac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1588 catgtccaactgatctggatttatcatctccactatttgtcccttagcaatacaataaac 1647
Query: 302 gctaggaaccttcacatccgggaatatttgctcaaagtaacccatttccc-tgcttccag 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1648 gctaggaaccttcacatccgggaatatttgctcaaagtaacccatttcccctgcttccag 1707
Query: 361 cagctaaacgtaaccaaacgcacgaatccttcaactgctcccctacaagtggtgtaaacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1708 cagctaaacgtaaccaaacgcacgaatccttcaactgctcccctacaagtggtgtaaacc 1767
Query: 421 acganctcaaaccacgaattatctccgcccgtagtataaaccaataacgccttgttctct 480
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1768 acgatctcaaaccacgaattatctccgcccgtagtataaaccaataacgccttgttctct 1827
Query: 481 cgcaatgattcttgtaccgcattttccacagaggaaacaaaatgcgtatccagtgtatcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1828 cgcaatgattcttgtaccgcattttccacagaggaaacaaaatgcgtatccagtgtatcc 1887
Query: 541 atcgtattcatatttgcctaatcttacacttaccactcctaaaaagctcaccactgcttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1888 atcgtattcatatttgcctaatcttacacttaccactcctaaaaagctcaccactgcttc 1947
Query: 601 gttgcttctatcaacagtatcggatttgtttattgttcactgattaarctataaacgtag 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1948 gttgcttctatcaacagtatcggatttgtttattgttcactgattaaactataaacgtag 2007
Query: 661 taaaacccctttcaatgtacgtttttataaatgcaaagaaatgacagaaactaatgacta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2008 taaaacccctttcaatgtacgtttttataaatgcaaagaaatgacagaaactaatgacta 2067
Query: 721 tcgcagatctgatcagaaaagaaaaacaatagttttatgatgatacttatggggaaaacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2068 tcgcagatctgatcagaaaagaaaaacaatagttttatgatgatacttatggggaaaacg 2127
Query: 781 ggatttatatacgagtctccgacgtgttatcctaggtaaatcacttggggttcagttagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2128 ggatttatatacgagtctccgacgtgttatcctaggtaaatcacttggggttcagttagg 2187
Query: 841 acggttggatgatattttgagcacatcagttgcgtaaatattgaatgtgcgtttggctga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2188 acggttggatgatattttgagcacatcagttgcgtaaatattgaatgtgcgtttggctga 2247
Query: 901 tatagctggaga-ttctgagatacg-amcgacaagaac-aaaaagaagt-aaagaag-ac 955
|||||||||||| |||||||||||| | |||||||||| |||||||||| ||||||| ||
Sbjct: 2248 tatagctggagatttctgagatacgaaccgacaagaacaaaaaagaagtaaaagaagaac 2307
Query: 956 acttcgattgatgtattg 973
||||||||||||||||||
Sbjct: 2308 acttcgattgatgtattg 2325
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6411
Number of Sequences: 1807
Number of extensions: 6411
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)